BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018C06LP1|AL427286
(987 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1765 1949 0.0
3x_Contig1482 169 1e-41
3x_Contig1769 167 4e-41
3x_Contig1658 161 3e-39
3x_Contig340 157 4e-38
>3x_Contig1765
Length = 24733
Score = 1949 bits (981), Expect = 0.0
Identities = 984/987 (99%)
Strand = Plus / Plus
Query: 1 ctgagaattgtaaagatgggttttctgtacaataaaagaaaacgagtaagaaacacatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16639 ctgagaattgtaaagatgggttttctgtacaataaaagaaaacgagtaagaaacacatcg 16698
Query: 61 agagccgttagtgaaaccttaccgatactattgaatttgcattgaatgaatcgaaatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16699 agagccgttagtgaaaccttaccgatactattgaatttgcattgaatgaatcgaaatgct 16758
Query: 121 atagtggattcagtttatgaaataggtagcaacgcttgataaaaaaattgagtgctcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16759 atagtggattcagtttatgaaataggtagcaacgcttgataaaaaaattgagtgctcaat 16818
Query: 181 aaattattgaataatgaaaaagaatgcatcggccgggaatcgaacccggggcccaacgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16819 aaattattgaataatgaaaaagaatgcatcggccgggaatcgaacccggggcccaacgat 16878
Query: 241 ggcaacgttggattttaccactaaaccaccgatgcctagtatttgttgatgtctgttgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16879 ggcaacgttggattttaccactaaaccaccgatgcctagtatttgttgatgtctgttgta 16938
Query: 301 ctaagtttggggtacagtwacgtaatgataatcatgcgactacatatatgctccgtgtga 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 16939 ctaagtttggggtacagtaacgtaatgataatcatgcgactacatatatgctccgtgtga 16998
Query: 361 caagtacttggacagtggttcatattagtaagtdaatcactctggggaacttccaaacat 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 16999 caagtacttggacagtggttcatattagtaagtaaatcactctggggaacttccaaacat 17058
Query: 421 atcttccaataacgcggtaaatcgcaggaaaggagaggttgtgaaacgggctgaaacaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17059 atcttccaataacgcggtaaatcgcaggaaaggagaggttgtgaaacgggctgaaacaat 17118
Query: 481 agttatctatcccttccattgctgctcgatgtgaaggaatgtttcttcctcatattgaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17119 agttatctatcccttccattgctgctcgatgtgaaggaatgtttcttcctcatattgaaa 17178
Query: 541 aaaaaaactaatgatttgaagctttagcataaactgaaatatccattggcaatctacaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17179 aaaaaaactaatgatttgaagctttagcataaactgaaatatccattggcaatctacaat 17238
Query: 601 taacagctataatctatcatccaggcccctctgaacattgcatcggatcaataatctatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17239 taacagctataatctatcatccaggcccctctgaacattgcatcggatcaataatctatc 17298
Query: 661 atagaacacattaagatatggctttaacttcgatctttggtggtagctcttcatcatctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17299 atagaacacattaagatatggctttaacttcgatctttggtggtagctcttcatcatctg 17358
Query: 721 gtaccccagccacatccagtcctagcgatgtcaagacccaacttaaatctcaaatctctc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17359 gtaccccagccacatccagtcctagcgatgtcaagacccaacttaaatctcaaatctctc 17418
Query: 781 aagaattagccatcgccaatgctaccgagttagttaacaaagtcactgagaactgttttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17419 aagaattagccatcgccaatgctaccgagttagttaacaaagtcactgagaactgttttg 17478
Query: 841 agaaatgtctgaatgctccatatgctgcttctcaagataactgcgtcgaccaatgtttgg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17479 agaaatgtctgaatgctccatatgctgcttctcaagataactgcgtcgaccaatgtttgg 17538
Query: 901 ctaaatatatgagaagttggaatgccatttcaaaggcttacattaacagaattcagcaag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17539 ctaaatatatgagaagttggaatgccatttcaaaggcttacattaacagaattcagcaag 17598
Query: 961 cytcggttaacggtgaaatctaagggg 987
| |||||||||||||||||||||||||
Sbjct: 17599 cttcggttaacggtgaaatctaagggg 17625
>3x_Contig1482
Length = 10060
Score = 169 bits (85), Expect = 1e-41
Identities = 97/101 (96%)
Strand = Plus / Minus
Query: 197 aaaaagaatgcatcggccgggaatcgaacccggggcccaacgatggcaacgttggatttt 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7842 aaaaagaatgcatcggccgggaatcgaacccggggcccaacgatggcaacgttggatttt 7783
Query: 257 accactaaaccaccgatgcctagtatttgttgatgtctgtt 297
||||||||||||||||||| ||||| || ||||||| ||||
Sbjct: 7782 accactaaaccaccgatgcttagtagttattgatgtgtgtt 7742
>3x_Contig1769
Length = 25795
Score = 167 bits (84), Expect = 4e-41
Identities = 93/96 (96%)
Strand = Plus / Minus
Query: 197 aaaaagaatgcatcggccgggaatcgaacccggggcccaacgatggcaacgttggatttt 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8380 aaaaagaatgcatcggccgggaatcgaacccggggcccaacgatggcaacgttggatttt 8321
Query: 257 accactaaaccaccgatgcctagtatttgttgatgt 292
||||||||||||||||||| ||||| || |||||||
Sbjct: 8320 accactaaaccaccgatgcttagtagtttttgatgt 8285
>3x_Contig1658
Length = 13395
Score = 161 bits (81), Expect = 3e-39
Identities = 84/85 (98%)
Strand = Plus / Minus
Query: 197 aaaaagaatgcatcggccgggaatcgaacccggggcccaacgatggcaacgttggatttt 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4253 aaaaagaatgcatcggccgggaatcgaacccggggcccaacgatggcaacgttggatttt 4194
Query: 257 accactaaaccaccgatgcctagta 281
||||||||||||||||||| |||||
Sbjct: 4193 accactaaaccaccgatgcttagta 4169
>3x_Contig340
Length = 1690
Score = 157 bits (79), Expect = 4e-38
Identities = 79/79 (100%)
Strand = Plus / Minus
Query: 197 aaaaagaatgcatcggccgggaatcgaacccggggcccaacgatggcaacgttggatttt 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaaagaatgcatcggccgggaatcgaacccggggcccaacgatggcaacgttggatttt 266
Query: 257 accactaaaccaccgatgc 275
|||||||||||||||||||
Sbjct: 265 accactaaaccaccgatgc 247
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8735
Number of Sequences: 1807
Number of extensions: 8735
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 5
length of query: 987
length of database: 10,358,551
effective HSP length: 16
effective length of query: 971
effective length of database: 10,329,639
effective search space: 10030079469
effective search space used: 10030079469
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)